Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRRC38Q5VT99 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 AP005242.2-201ENST00000580065 1175 ntBASIC19.4■□□□□ 0.7
LRRC38Q5VT99 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC38Q5VT99 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC38Q5VT99 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
LRRC38Q5VT99 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC38Q5VT99 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.39■□□□□ 0.7
LRRC38Q5VT99 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.39■□□□□ 0.69
LRRC38Q5VT99 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC38Q5VT99 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 AL355355.2-201ENST00000442321 338 ntBASIC19.38■□□□□ 0.69
LRRC38Q5VT99 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 AC034236.2-201ENST00000606662 1610 ntBASIC19.38■□□□□ 0.69
LRRC38Q5VT99 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC38Q5VT99 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LRRC38Q5VT99 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms