Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 MYLKP1-201ENST00000509077 1580 ntBASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 TSPY14P-201ENST00000303979 915 ntBASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 AC010947.1-201ENST00000623454 693 ntBASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 MYC-208ENST00000641036 567 ntBASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.18■□□□□ 0.18
RSPO1Q2MKA7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 MIR3180-5-201ENST00000583743 153 ntBASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 AL390961.4-201ENST00000623958 2535 ntBASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 KRT8P50-201ENST00000562022 1438 ntBASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO1Q2MKA7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 AC034236.2-201ENST00000606662 1610 ntBASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 AC093827.2-201ENST00000512654 315 ntBASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO1Q2MKA7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.15■□□□□ 0.18
RSPO1Q2MKA7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO1Q2MKA7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO1Q2MKA7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO1Q2MKA7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO1Q2MKA7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO1Q2MKA7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO1Q2MKA7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms