Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 NOC2LP2-201ENST00000407594 1944 ntBASIC14.31□□□□□ -0.12
HIST1H1AQ02539 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 AC069544.1-201ENST00000609399 999 ntBASIC14.31□□□□□ -0.12
HIST1H1AQ02539 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1AQ02539 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 AC012313.1-201ENST00000593393 3059 ntBASIC14.3□□□□□ -0.12
HIST1H1AQ02539 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 AC239809.2-201ENST00000415381 517 ntBASIC14.3□□□□□ -0.12
HIST1H1AQ02539 AC026366.1-201ENST00000488803 879 ntBASIC14.3□□□□□ -0.12
HIST1H1AQ02539 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 AC008403.3-201ENST00000598924 454 ntBASIC14.3□□□□□ -0.12
HIST1H1AQ02539 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1AQ02539 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 AC139713.2-201ENST00000641328 2723 ntBASIC14.29□□□□□ -0.12
HIST1H1AQ02539 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1AQ02539 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms