Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PMS1P54277 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PMS1P54277 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PMS1P54277 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PMS1P54277 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PMS1P54277 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PMS1P54277 GPAT2P1-201ENST00000444924 1672 ntBASIC20.58■□□□□ 0.88
PMS1P54277 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.57■□□□□ 0.88
PMS1P54277 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.57■□□□□ 0.88
PMS1P54277 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.57■□□□□ 0.88
PMS1P54277 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PMS1P54277 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.57■□□□□ 0.88
PMS1P54277 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PMS1P54277 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PMS1P54277 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PMS1P54277 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PMS1P54277 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.57■□□□□ 0.88
PMS1P54277 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.57■□□□□ 0.88
PMS1P54277 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.57■□□□□ 0.88
PMS1P54277 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.57■□□□□ 0.88
PMS1P54277 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.57■□□□□ 0.88
PMS1P54277 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PMS1P54277 AC005332.8-201ENST00000622750 2735 ntBASIC20.57■□□□□ 0.88
PMS1P54277 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PMS1P54277 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMS1P54277 AL109659.2-201ENST00000606809 1674 ntBASIC20.57■□□□□ 0.88
PMS1P54277 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.57■□□□□ 0.88
PMS1P54277 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.57■□□□□ 0.88
PMS1P54277 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMS1P54277 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.57■□□□□ 0.88
PMS1P54277 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMS1P54277 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMS1P54277 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS1P54277 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PMS1P54277 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.56■□□□□ 0.88
PMS1P54277 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS1P54277 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMS1P54277 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS1P54277 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PMS1P54277 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PMS1P54277 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.56■□□□□ 0.88
PMS1P54277 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.56■□□□□ 0.88
PMS1P54277 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PMS1P54277 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS1P54277 AL023284.2-201ENST00000405850 579 ntBASIC20.56■□□□□ 0.88
PMS1P54277 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.56■□□□□ 0.88
PMS1P54277 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS1P54277 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS1P54277 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS1P54277 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS1P54277 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.56■□□□□ 0.88
PMS1P54277 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.56■□□□□ 0.88
PMS1P54277 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMS1P54277 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMS1P54277 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS1P54277 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PMS1P54277 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS1P54277 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS1P54277 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS1P54277 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMS1P54277 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMS1P54277 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
PMS1P54277 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS1P54277 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS1P54277 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.55■□□□□ 0.88
PMS1P54277 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMS1P54277 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.55■□□□□ 0.88
PMS1P54277 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS1P54277 AC097488.1-201ENST00000507834 756 ntBASIC20.55■□□□□ 0.88
PMS1P54277 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.55■□□□□ 0.88
PMS1P54277 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.55■□□□□ 0.88
PMS1P54277 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.55■□□□□ 0.88
PMS1P54277 DGCR10-201ENST00000609839 495 ntBASIC20.55■□□□□ 0.88
PMS1P54277 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.55■□□□□ 0.88
PMS1P54277 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PMS1P54277 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.55■□□□□ 0.88
PMS1P54277 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PMS1P54277 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS1P54277 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.55■□□□□ 0.88
PMS1P54277 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMS1P54277 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.55■□□□□ 0.88
PMS1P54277 ABALON-201ENST00000629058 1903 ntBASIC20.55■□□□□ 0.88
PMS1P54277 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS1P54277 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.54■□□□□ 0.88
PMS1P54277 AC135776.1-201ENST00000319817 2481 ntBASIC20.54■□□□□ 0.88
PMS1P54277 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS1P54277 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PMS1P54277 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.54■□□□□ 0.88
PMS1P54277 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PMS1P54277 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.54■□□□□ 0.88
PMS1P54277 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.54■□□□□ 0.88
PMS1P54277 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.54■□□□□ 0.88
PMS1P54277 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PMS1P54277 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMS1P54277 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.54■□□□□ 0.88
PMS1P54277 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.54■□□□□ 0.88
PMS1P54277 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.54■□□□□ 0.88
PMS1P54277 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.54■□□□□ 0.88
PMS1P54277 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.54■□□□□ 0.88
PMS1P54277 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms