Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.07■□□□□ 0.64
ATXN3P54252 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATXN3P54252 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.07■□□□□ 0.64
ATXN3P54252 VENTXP5-201ENST00000523979 775 ntBASIC19.07■□□□□ 0.64
ATXN3P54252 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATXN3P54252 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.07■□□□□ 0.64
ATXN3P54252 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
ATXN3P54252 AL023803.3-201ENST00000615559 522 ntBASIC19.07■□□□□ 0.64
ATXN3P54252 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.07■□□□□ 0.64
ATXN3P54252 HCG11-201ENST00000411553 5696 ntBASIC19.07■□□□□ 0.64
ATXN3P54252 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATXN3P54252 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATXN3P54252 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATXN3P54252 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.07■□□□□ 0.64
ATXN3P54252 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATXN3P54252 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATXN3P54252 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.06■□□□□ 0.64
ATXN3P54252 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
ATXN3P54252 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ATXN3P54252 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATXN3P54252 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
ATXN3P54252 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATXN3P54252 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.06■□□□□ 0.64
ATXN3P54252 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATXN3P54252 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATXN3P54252 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.06■□□□□ 0.64
ATXN3P54252 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.06■□□□□ 0.64
ATXN3P54252 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATXN3P54252 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATXN3P54252 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
ATXN3P54252 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
ATXN3P54252 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATXN3P54252 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.06■□□□□ 0.64
ATXN3P54252 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.06■□□□□ 0.64
ATXN3P54252 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.06■□□□□ 0.64
ATXN3P54252 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATXN3P54252 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.06■□□□□ 0.64
ATXN3P54252 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATXN3P54252 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATXN3P54252 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.06■□□□□ 0.64
ATXN3P54252 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ATXN3P54252 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ATXN3P54252 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ATXN3P54252 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.05■□□□□ 0.64
ATXN3P54252 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.05■□□□□ 0.64
ATXN3P54252 CA15P1-201ENST00000481698 905 ntBASIC19.05■□□□□ 0.64
ATXN3P54252 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.05■□□□□ 0.64
ATXN3P54252 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.05■□□□□ 0.64
ATXN3P54252 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.05■□□□□ 0.64
ATXN3P54252 AL441883.1-201ENST00000566170 1045 ntBASIC19.05■□□□□ 0.64
ATXN3P54252 CLEC4GP1-201ENST00000596555 870 ntBASIC19.05■□□□□ 0.64
ATXN3P54252 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
ATXN3P54252 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.05■□□□□ 0.64
ATXN3P54252 BX119927.1-201ENST00000636596 1552 ntBASIC19.05■□□□□ 0.64
ATXN3P54252 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ATXN3P54252 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATXN3P54252 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
ATXN3P54252 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
ATXN3P54252 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
ATXN3P54252 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.04■□□□□ 0.64
ATXN3P54252 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
ATXN3P54252 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.04■□□□□ 0.64
ATXN3P54252 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.04■□□□□ 0.64
ATXN3P54252 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
ATXN3P54252 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.04■□□□□ 0.64
ATXN3P54252 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.04■□□□□ 0.64
ATXN3P54252 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ATXN3P54252 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ATXN3P54252 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.04■□□□□ 0.64
ATXN3P54252 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATXN3P54252 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.04■□□□□ 0.64
ATXN3P54252 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms