Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC007613.1-201ENST00000572811 2597 ntBASIC17.51■□□□□ 0.39
SMSP52788 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.51■□□□□ 0.39
SMSP52788 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMSP52788 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.51■□□□□ 0.39
SMSP52788 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SMSP52788 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 AC090164.3-201ENST00000610780 2143 ntBASIC17.5■□□□□ 0.39
SMSP52788 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
SMSP52788 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.5■□□□□ 0.39
SMSP52788 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.5■□□□□ 0.39
SMSP52788 AC104076.2-201ENST00000448912 469 ntBASIC17.5■□□□□ 0.39
SMSP52788 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.5■□□□□ 0.39
SMSP52788 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.5■□□□□ 0.39
SMSP52788 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.5■□□□□ 0.39
SMSP52788 AL445675.2-201ENST00000620291 557 ntBASIC17.5■□□□□ 0.39
SMSP52788 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.5■□□□□ 0.39
SMSP52788 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMSP52788 WIZP1-201ENST00000531444 2299 ntBASIC17.5■□□□□ 0.39
SMSP52788 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.5■□□□□ 0.39
SMSP52788 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.49■□□□□ 0.39
SMSP52788 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.49■□□□□ 0.39
SMSP52788 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SMSP52788 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.49■□□□□ 0.39
SMSP52788 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.49■□□□□ 0.39
SMSP52788 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMSP52788 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.49■□□□□ 0.39
SMSP52788 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
SMSP52788 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMSP52788 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.49■□□□□ 0.39
SMSP52788 C1QL1P1-201ENST00000568105 661 ntBASIC17.49■□□□□ 0.39
SMSP52788 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.49■□□□□ 0.39
SMSP52788 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.49■□□□□ 0.39
SMSP52788 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SMSP52788 AC131212.4-201ENST00000623606 975 ntBASIC17.49■□□□□ 0.39
SMSP52788 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.49■□□□□ 0.39
SMSP52788 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SMSP52788 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMSP52788 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 IRX1P1-201ENST00000438849 1838 ntBASIC17.49■□□□□ 0.39
SMSP52788 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMSP52788 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SMSP52788 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.48■□□□□ 0.39
SMSP52788 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
SMSP52788 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.48■□□□□ 0.39
SMSP52788 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SMSP52788 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SMSP52788 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMSP52788 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SMSP52788 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms