Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC34P49427 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC34P49427 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC34P49427 AL390719.1-204ENST00000412397 1219 ntBASIC14.77□□□□□ -0.05
CDC34P49427 CYP2T1P-201ENST00000432607 1285 ntBASIC14.77□□□□□ -0.05
CDC34P49427 YBX1P10-201ENST00000444752 975 ntBASIC14.77□□□□□ -0.05
CDC34P49427 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.77□□□□□ -0.05
CDC34P49427 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC34P49427 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC34P49427 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CDC34P49427 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC34P49427 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC34P49427 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC34P49427 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CDC34P49427 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CDC34P49427 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.77□□□□□ -0.05
CDC34P49427 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC34P49427 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC34P49427 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDC34P49427 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CDC34P49427 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CDC34P49427 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.76□□□□□ -0.05
CDC34P49427 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CDC34P49427 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDC34P49427 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CDC34P49427 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC34P49427 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC34P49427 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.75□□□□□ -0.05
CDC34P49427 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC34P49427 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.75□□□□□ -0.05
CDC34P49427 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 GPX1P1-201ENST00000388829 606 ntBASIC14.75□□□□□ -0.05
CDC34P49427 SLC25A6P5-201ENST00000435663 894 ntBASIC14.75□□□□□ -0.05
CDC34P49427 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC34P49427 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.75□□□□□ -0.05
CDC34P49427 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CDC34P49427 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CDC34P49427 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 KRT17P1-201ENST00000399211 1546 ntBASIC14.75□□□□□ -0.05
CDC34P49427 AP006587.1-201ENST00000534129 1502 ntBASIC14.75□□□□□ -0.05
CDC34P49427 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDC34P49427 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDC34P49427 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDC34P49427 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC34P49427 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CDC34P49427 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CDC34P49427 AC135776.1-201ENST00000319817 2481 ntBASIC14.74□□□□□ -0.05
CDC34P49427 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC34P49427 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDC34P49427 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.74□□□□□ -0.05
CDC34P49427 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CDC34P49427 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDC34P49427 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms