Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
GRIK1P39086 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GRIK1P39086 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GRIK1P39086 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.69■□□□□ 0.74
GRIK1P39086 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GRIK1P39086 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
GRIK1P39086 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
GRIK1P39086 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
GRIK1P39086 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 HEIH-201ENST00000623091 1652 ntBASIC19.68■□□□□ 0.74
GRIK1P39086 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GRIK1P39086 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.68■□□□□ 0.74
GRIK1P39086 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.68■□□□□ 0.74
GRIK1P39086 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
GRIK1P39086 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.68■□□□□ 0.74
GRIK1P39086 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.68■□□□□ 0.74
GRIK1P39086 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.68■□□□□ 0.74
GRIK1P39086 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.68■□□□□ 0.74
GRIK1P39086 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.68■□□□□ 0.74
GRIK1P39086 AL358472.4-201ENST00000633140 710 ntBASIC19.68■□□□□ 0.74
GRIK1P39086 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 AC034236.2-201ENST00000606662 1610 ntBASIC19.68■□□□□ 0.74
GRIK1P39086 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.68■□□□□ 0.74
GRIK1P39086 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.68■□□□□ 0.74
GRIK1P39086 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GRIK1P39086 KRT8P7-201ENST00000533003 1432 ntBASIC19.68■□□□□ 0.74
GRIK1P39086 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.67■□□□□ 0.74
GRIK1P39086 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.67■□□□□ 0.74
GRIK1P39086 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.67■□□□□ 0.74
GRIK1P39086 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GRIK1P39086 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.67■□□□□ 0.74
GRIK1P39086 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.67■□□□□ 0.74
GRIK1P39086 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
GRIK1P39086 AL121956.5-201ENST00000625261 221 ntBASIC19.67■□□□□ 0.74
GRIK1P39086 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.67■□□□□ 0.74
GRIK1P39086 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GRIK1P39086 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 LINC01311-201ENST00000565162 1445 ntBASIC19.67■□□□□ 0.74
GRIK1P39086 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
GRIK1P39086 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.67■□□□□ 0.74
GRIK1P39086 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.67■□□□□ 0.74
GRIK1P39086 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GRIK1P39086 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.66■□□□□ 0.74
GRIK1P39086 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GRIK1P39086 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
GRIK1P39086 AC006333.2-201ENST00000607957 2099 ntBASIC19.66■□□□□ 0.74
GRIK1P39086 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
GRIK1P39086 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GRIK1P39086 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.66■□□□□ 0.74
GRIK1P39086 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
GRIK1P39086 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GRIK1P39086 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GRIK1P39086 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GRIK1P39086 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GRIK1P39086 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.66■□□□□ 0.74
GRIK1P39086 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.66■□□□□ 0.74
GRIK1P39086 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.66■□□□□ 0.74
GRIK1P39086 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.66■□□□□ 0.74
GRIK1P39086 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.66■□□□□ 0.74
GRIK1P39086 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
GRIK1P39086 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GRIK1P39086 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
GRIK1P39086 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.66■□□□□ 0.74
GRIK1P39086 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
GRIK1P39086 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms