Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP8P22894 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MMP8P22894 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP8P22894 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MMP8P22894 EGLN1P1-201ENST00000531623 762 ntBASIC19.65■□□□□ 0.74
MMP8P22894 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP8P22894 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.65■□□□□ 0.74
MMP8P22894 AC010947.1-201ENST00000623454 693 ntBASIC19.65■□□□□ 0.74
MMP8P22894 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP8P22894 AC135050.7-201ENST00000624508 2218 ntBASIC19.65■□□□□ 0.74
MMP8P22894 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP8P22894 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP8P22894 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP8P22894 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.65■□□□□ 0.74
MMP8P22894 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
MMP8P22894 MYLKP1-201ENST00000509077 1580 ntBASIC19.65■□□□□ 0.74
MMP8P22894 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP8P22894 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.65■□□□□ 0.74
MMP8P22894 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP8P22894 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP8P22894 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MMP8P22894 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MMP8P22894 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
MMP8P22894 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.64■□□□□ 0.74
MMP8P22894 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MMP8P22894 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.64■□□□□ 0.74
MMP8P22894 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.64■□□□□ 0.74
MMP8P22894 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP8P22894 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP8P22894 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
MMP8P22894 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.64■□□□□ 0.73
MMP8P22894 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP8P22894 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.64■□□□□ 0.73
MMP8P22894 MMP23A-201ENST00000234610 1017 ntBASIC19.64■□□□□ 0.73
MMP8P22894 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP8P22894 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
MMP8P22894 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP8P22894 AC010653.2-201ENST00000623505 997 ntBASIC19.64■□□□□ 0.73
MMP8P22894 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MMP8P22894 AC036111.1-201ENST00000533973 1582 ntBASIC19.64■□□□□ 0.73
MMP8P22894 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
MMP8P22894 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MMP8P22894 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
MMP8P22894 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
MMP8P22894 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MMP8P22894 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP8P22894 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP8P22894 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP8P22894 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP8P22894 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.63■□□□□ 0.73
MMP8P22894 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.63■□□□□ 0.73
MMP8P22894 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MMP8P22894 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP8P22894 INGX-201ENST00000359239 846 ntBASIC19.63■□□□□ 0.73
MMP8P22894 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.63■□□□□ 0.73
MMP8P22894 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.63■□□□□ 0.73
MMP8P22894 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MMP8P22894 WWOX-216ENST00000569818 525 ntBASIC19.63■□□□□ 0.73
MMP8P22894 CR769767.2-201ENST00000622735 460 ntBASIC19.63■□□□□ 0.73
MMP8P22894 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP8P22894 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP8P22894 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.63■□□□□ 0.73
MMP8P22894 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.63■□□□□ 0.73
MMP8P22894 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP8P22894 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP8P22894 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP8P22894 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
MMP8P22894 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MMP8P22894 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.62■□□□□ 0.73
MMP8P22894 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
MMP8P22894 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
MMP8P22894 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 AP000593.1-201ENST00000393668 712 ntBASIC19.62■□□□□ 0.73
MMP8P22894 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.62■□□□□ 0.73
MMP8P22894 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.62■□□□□ 0.73
MMP8P22894 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
MMP8P22894 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
MMP8P22894 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.62■□□□□ 0.73
MMP8P22894 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
MMP8P22894 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP8P22894 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.61■□□□□ 0.73
MMP8P22894 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP8P22894 KRT8P50-201ENST00000562022 1438 ntBASIC19.61■□□□□ 0.73
MMP8P22894 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
MMP8P22894 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms