Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB4AP20338 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB4AP20338 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB4AP20338 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RAB4AP20338 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB4AP20338 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB4AP20338 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RAB4AP20338 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB4AP20338 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAB4AP20338 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB4AP20338 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
RAB4AP20338 AL118508.1-201ENST00000613502 2345 ntBASIC14.3□□□□□ -0.12
RAB4AP20338 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB4AP20338 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB4AP20338 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB4AP20338 AC105265.2-201ENST00000467189 838 ntBASIC14.3□□□□□ -0.12
RAB4AP20338 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.3□□□□□ -0.12
RAB4AP20338 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB4AP20338 AC243732.1-201ENST00000612648 864 ntBASIC14.3□□□□□ -0.12
RAB4AP20338 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.3□□□□□ -0.12
RAB4AP20338 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB4AP20338 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAB4AP20338 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB4AP20338 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RAB4AP20338 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB4AP20338 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB4AP20338 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB4AP20338 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB4AP20338 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB4AP20338 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB4AP20338 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 AL136116.3-201ENST00000402907 1138 ntBASIC14.29□□□□□ -0.12
RAB4AP20338 PGM5P4-201ENST00000421970 445 ntBASIC14.29□□□□□ -0.12
RAB4AP20338 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.29□□□□□ -0.12
RAB4AP20338 AL356652.1-201ENST00000615962 565 ntBASIC14.29□□□□□ -0.12
RAB4AP20338 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB4AP20338 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB4AP20338 KRT16P6-202ENST00000425692 1426 ntBASIC14.29□□□□□ -0.12
RAB4AP20338 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB4AP20338 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB4AP20338 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB4AP20338 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB4AP20338 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
RAB4AP20338 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RAB4AP20338 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB4AP20338 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB4AP20338 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
RAB4AP20338 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RAB4AP20338 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB4AP20338 AC080080.1-201ENST00000625121 2420 ntBASIC14.29□□□□□ -0.12
RAB4AP20338 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB4AP20338 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
RAB4AP20338 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.28□□□□□ -0.12
RAB4AP20338 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms