Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT4P19013 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT4P19013 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT4P19013 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT4P19013 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT4P19013 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT4P19013 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT4P19013 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT4P19013 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.77■□□□□ 0.6
KRT4P19013 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT4P19013 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT4P19013 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT4P19013 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT4P19013 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
KRT4P19013 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT4P19013 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT4P19013 AC134043.2-201ENST00000624206 2238 ntBASIC18.77■□□□□ 0.59
KRT4P19013 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT4P19013 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT4P19013 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT4P19013 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT4P19013 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
KRT4P19013 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT4P19013 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.76■□□□□ 0.59
KRT4P19013 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KRT4P19013 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
KRT4P19013 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT4P19013 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT4P19013 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT4P19013 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT4P19013 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
KRT4P19013 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT4P19013 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT4P19013 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT4P19013 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.76■□□□□ 0.59
KRT4P19013 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT4P19013 SOX15-203ENST00000570788 1093 ntBASIC18.76■□□□□ 0.59
KRT4P19013 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT4P19013 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.76■□□□□ 0.59
KRT4P19013 AC008687.6-201ENST00000596318 630 ntBASIC18.76■□□□□ 0.59
KRT4P19013 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT4P19013 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT4P19013 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
KRT4P19013 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.76■□□□□ 0.59
KRT4P19013 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.76■□□□□ 0.59
KRT4P19013 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT4P19013 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT4P19013 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT4P19013 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
KRT4P19013 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT4P19013 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT4P19013 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.75■□□□□ 0.59
KRT4P19013 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT4P19013 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.75■□□□□ 0.59
KRT4P19013 AC068587.9-201ENST00000641814 219 ntBASIC18.75■□□□□ 0.59
KRT4P19013 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT4P19013 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT4P19013 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT4P19013 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT4P19013 KRT8P41-201ENST00000533985 1514 ntBASIC18.74■□□□□ 0.59
KRT4P19013 LINC00896-202ENST00000609602 2128 ntBASIC18.74■□□□□ 0.59
KRT4P19013 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT4P19013 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT4P19013 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT4P19013 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
KRT4P19013 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT4P19013 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT4P19013 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT4P19013 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT4P19013 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT4P19013 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT4P19013 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.74■□□□□ 0.59
KRT4P19013 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.74■□□□□ 0.59
KRT4P19013 MIR4758-201ENST00000577688 71 ntBASIC18.74■□□□□ 0.59
KRT4P19013 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT4P19013 IKBKGP1-201ENST00000612193 1073 ntBASIC18.74■□□□□ 0.59
KRT4P19013 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.74■□□□□ 0.59
KRT4P19013 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT4P19013 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
KRT4P19013 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
KRT4P19013 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT4P19013 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
KRT4P19013 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
KRT4P19013 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms