Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.92□□□□□ -0.18
SMIM17P0DL12 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM17P0DL12 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.92□□□□□ -0.18
SMIM17P0DL12 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM17P0DL12 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM17P0DL12 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM17P0DL12 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.92□□□□□ -0.18
SMIM17P0DL12 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SMIM17P0DL12 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.92□□□□□ -0.18
SMIM17P0DL12 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM17P0DL12 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SMIM17P0DL12 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM17P0DL12 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SMIM17P0DL12 KRT17P1-201ENST00000399211 1546 ntBASIC13.91□□□□□ -0.18
SMIM17P0DL12 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 AC063926.3-201ENST00000624734 5658 ntBASIC13.91□□□□□ -0.18
SMIM17P0DL12 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 AL512625.2-201ENST00000417533 625 ntBASIC13.91□□□□□ -0.18
SMIM17P0DL12 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.91□□□□□ -0.18
SMIM17P0DL12 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SMIM17P0DL12 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.91□□□□□ -0.18
SMIM17P0DL12 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.91□□□□□ -0.18
SMIM17P0DL12 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.91□□□□□ -0.18
SMIM17P0DL12 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.91□□□□□ -0.18
SMIM17P0DL12 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.91□□□□□ -0.18
SMIM17P0DL12 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
SMIM17P0DL12 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
SMIM17P0DL12 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM17P0DL12 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.91□□□□□ -0.18
SMIM17P0DL12 FP475955.4-201ENST00000623131 1990 ntBASIC13.91□□□□□ -0.18
SMIM17P0DL12 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM17P0DL12 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.9□□□□□ -0.18
SMIM17P0DL12 AL031598.1-201ENST00000561511 1773 ntBASIC13.9□□□□□ -0.18
SMIM17P0DL12 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM17P0DL12 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM17P0DL12 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SMIM17P0DL12 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
SMIM17P0DL12 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.9□□□□□ -0.19
SMIM17P0DL12 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SMIM17P0DL12 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM17P0DL12 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.89□□□□□ -0.19
SMIM17P0DL12 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM17P0DL12 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM17P0DL12 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM17P0DL12 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM17P0DL12 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM17P0DL12 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms