Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RAB40ALP0C0E4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 ATP5G2P1-201ENST00000433580 426 ntBASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 AC092597.1-201ENST00000487352 616 ntBASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 AC125437.2-201ENST00000625180 2167 ntBASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40ALP0C0E4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 AL512353.2-201ENST00000448759 1962 ntBASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB40ALP0C0E4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 FEM1AP3-201ENST00000403722 1741 ntBASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAB40ALP0C0E4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 MIR3917-201ENST00000580971 93 ntBASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 TNXA-203ENST00000507684 2038 ntBASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 AL158211.5-201ENST00000623583 2518 ntBASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 AP000974.1-201ENST00000623909 2387 ntBASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB40ALP0C0E4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB40ALP0C0E4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms