Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLTAP09496 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CLTAP09496 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLTAP09496 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CLTAP09496 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CLTAP09496 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.42■□□□□ 0.86
CLTAP09496 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.42■□□□□ 0.86
CLTAP09496 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CLTAP09496 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLTAP09496 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.42■□□□□ 0.86
CLTAP09496 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.42■□□□□ 0.86
CLTAP09496 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.42■□□□□ 0.86
CLTAP09496 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.42■□□□□ 0.86
CLTAP09496 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.42■□□□□ 0.86
CLTAP09496 MIR3180-5-201ENST00000583743 153 ntBASIC20.42■□□□□ 0.86
CLTAP09496 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.42■□□□□ 0.86
CLTAP09496 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLTAP09496 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLTAP09496 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.42■□□□□ 0.86
CLTAP09496 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLTAP09496 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLTAP09496 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLTAP09496 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLTAP09496 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLTAP09496 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CLTAP09496 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
CLTAP09496 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.41■□□□□ 0.86
CLTAP09496 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 MIR1224-201ENST00000408193 85 ntBASIC20.41■□□□□ 0.86
CLTAP09496 AC117947.1-201ENST00000427448 529 ntBASIC20.41■□□□□ 0.86
CLTAP09496 AC009947.2-201ENST00000444014 672 ntBASIC20.41■□□□□ 0.86
CLTAP09496 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
CLTAP09496 NEK4P2-201ENST00000580004 1012 ntBASIC20.41■□□□□ 0.86
CLTAP09496 AC139887.4-201ENST00000607877 719 ntBASIC20.41■□□□□ 0.86
CLTAP09496 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 AL031432.5-201ENST00000641059 760 ntBASIC20.41■□□□□ 0.86
CLTAP09496 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
CLTAP09496 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CLTAP09496 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.41■□□□□ 0.86
CLTAP09496 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.41■□□□□ 0.86
CLTAP09496 TNXA-203ENST00000507684 2038 ntBASIC20.41■□□□□ 0.86
CLTAP09496 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CLTAP09496 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLTAP09496 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTAP09496 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CLTAP09496 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTAP09496 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTAP09496 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTAP09496 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.4■□□□□ 0.86
CLTAP09496 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTAP09496 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTAP09496 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.4■□□□□ 0.86
CLTAP09496 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTAP09496 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTAP09496 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.4■□□□□ 0.86
CLTAP09496 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTAP09496 AP000523.1-201ENST00000398242 1049 ntBASIC20.4■□□□□ 0.86
CLTAP09496 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.4■□□□□ 0.86
CLTAP09496 AK4P3-201ENST00000418260 669 ntBASIC20.4■□□□□ 0.86
CLTAP09496 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLTAP09496 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.4■□□□□ 0.86
CLTAP09496 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.4■□□□□ 0.86
CLTAP09496 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.4■□□□□ 0.86
CLTAP09496 DUX4L26-201ENST00000489078 1255 ntBASIC20.4■□□□□ 0.86
CLTAP09496 AL049597.2-201ENST00000565575 961 ntBASIC20.4■□□□□ 0.86
CLTAP09496 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLTAP09496 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLTAP09496 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.4■□□□□ 0.86
CLTAP09496 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
CLTAP09496 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLTAP09496 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLTAP09496 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLTAP09496 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.39■□□□□ 0.86
CLTAP09496 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLTAP09496 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.39■□□□□ 0.86
CLTAP09496 AC036111.1-201ENST00000533973 1582 ntBASIC20.39■□□□□ 0.85
CLTAP09496 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLTAP09496 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CLTAP09496 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLTAP09496 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLTAP09496 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLTAP09496 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.39■□□□□ 0.85
CLTAP09496 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLTAP09496 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLTAP09496 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CLTAP09496 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLTAP09496 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLTAP09496 YBX1P2-201ENST00000489612 999 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms