Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TPM3P06753 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.95■□□□□ 0.94
TPM3P06753 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.95■□□□□ 0.94
TPM3P06753 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TPM3P06753 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TPM3P06753 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TPM3P06753 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.95■□□□□ 0.94
TPM3P06753 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TPM3P06753 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TPM3P06753 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.95■□□□□ 0.94
TPM3P06753 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TPM3P06753 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TPM3P06753 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
TPM3P06753 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TPM3P06753 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TPM3P06753 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TPM3P06753 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TPM3P06753 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TPM3P06753 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
TPM3P06753 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TPM3P06753 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.94■□□□□ 0.94
TPM3P06753 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.94■□□□□ 0.94
TPM3P06753 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.94■□□□□ 0.94
TPM3P06753 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
TPM3P06753 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TPM3P06753 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.94■□□□□ 0.94
TPM3P06753 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.94■□□□□ 0.94
TPM3P06753 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.94■□□□□ 0.94
TPM3P06753 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.94■□□□□ 0.94
TPM3P06753 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.94■□□□□ 0.94
TPM3P06753 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.94■□□□□ 0.94
TPM3P06753 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TPM3P06753 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.94■□□□□ 0.94
TPM3P06753 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TPM3P06753 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.94■□□□□ 0.94
TPM3P06753 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.94■□□□□ 0.94
TPM3P06753 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TPM3P06753 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TPM3P06753 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.93■□□□□ 0.94
TPM3P06753 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
TPM3P06753 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
TPM3P06753 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.93■□□□□ 0.94
TPM3P06753 TSPY21P-201ENST00000433481 731 ntBASIC20.93■□□□□ 0.94
TPM3P06753 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TPM3P06753 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.93■□□□□ 0.94
TPM3P06753 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.93■□□□□ 0.94
TPM3P06753 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.93■□□□□ 0.94
TPM3P06753 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.93■□□□□ 0.94
TPM3P06753 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.93■□□□□ 0.94
TPM3P06753 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TPM3P06753 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TPM3P06753 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TPM3P06753 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TPM3P06753 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.93■□□□□ 0.94
TPM3P06753 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
TPM3P06753 AC012313.1-201ENST00000593393 3059 ntBASIC20.93■□□□□ 0.94
TPM3P06753 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TPM3P06753 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.92■□□□□ 0.94
TPM3P06753 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.92■□□□□ 0.94
TPM3P06753 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.92■□□□□ 0.94
TPM3P06753 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TPM3P06753 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.92■□□□□ 0.94
TPM3P06753 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms