Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 OGFOD2-203ENST00000406539 2274 ntTSL 216.06■□□□□ 0.164e-6■□□□□ 9.5
SMNDC1O75940 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.144e-6■□□□□ 9.5
SMNDC1O75940 TRMT2A-209ENST00000463710 757 ntTSL 315.36■□□□□ 0.055e-19■□□□□ 9.5
SMNDC1O75940 TRMT2A-212ENST00000471040 848 ntTSL 315.36■□□□□ 0.055e-19■□□□□ 9.5
SMNDC1O75940 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.044e-6■□□□□ 9.5
SMNDC1O75940 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.01□□□□□ -0.014e-6■□□□□ 9.5
SMNDC1O75940 IRAK1-211ENST00000463031 357 ntTSL 314.56□□□□□ -0.084e-6■□□□□ 9.5
SMNDC1O75940 MIR210HG-202ENST00000528245 659 ntTSL 314.49□□□□□ -0.094e-6■□□□□ 9.5
SMNDC1O75940 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.41□□□□□ -0.14e-6■□□□□ 9.5
SMNDC1O75940 TRMT2A-208ENST00000459644 582 ntTSL 313.11□□□□□ -0.315e-19■□□□□ 9.5
SMNDC1O75940 MIR210HG-204ENST00000534540 367 ntTSL 212.98□□□□□ -0.334e-6■□□□□ 9.5
SMNDC1O75940 ACIN1-221ENST00000557432 642 ntTSL 311.46□□□□□ -0.574e-6■□□□□ 9.5
SMNDC1O75940 ABHD16A-204ENST00000468205 913 ntTSL 211.33□□□□□ -0.64e-6■□□□□ 9.5
SMNDC1O75940 ABHD16A-206ENST00000474007 506 ntTSL 511.32□□□□□ -0.64e-6■□□□□ 9.5
SMNDC1O75940 BRD4-206ENST00000594842 408 ntTSL 211.05□□□□□ -0.644e-6■□□□□ 9.5
SMNDC1O75940 TMC6-217ENST00000590934 386 ntTSL 510.83□□□□□ -0.684e-6■□□□□ 9.5
SMNDC1O75940 C16orf58-208ENST00000567673 766 ntTSL 210.59□□□□□ -0.714e-6■□□□□ 9.5
SMNDC1O75940 ABHD16A-211ENST00000490209 615 ntTSL 29.79□□□□□ -0.844e-6■□□□□ 9.5
SMNDC1O75940 CSNK1D-210ENST00000579308 598 ntTSL 29.6□□□□□ -0.874e-6■□□□□ 9.5
SMNDC1O75940 ACIN1-208ENST00000553721 610 ntTSL 39.26□□□□□ -0.934e-6■□□□□ 9.5
SMNDC1O75940 MIR210-201ENST00000362168 110 ntBASIC9.22□□□□□ -0.934e-6■□□□□ 9.5
SMNDC1O75940 FUBP3-204ENST00000472006 284 ntTSL 28.73□□□□□ -1.014e-6■□□□□ 9.5
SMNDC1O75940 ACIN1-212ENST00000554979 366 ntTSL 28.52□□□□□ -1.054e-6■□□□□ 9.5
SMNDC1O75940 ACIN1-214ENST00000555352 579 ntTSL 48.51□□□□□ -1.054e-6■□□□□ 9.5
SMNDC1O75940 ACIN1-207ENST00000553501 716 ntTSL 27.96□□□□□ -1.144e-6■□□□□ 9.5
SMNDC1O75940 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.66□□□□□ -1.984e-6■□□□□ 9.5
SMNDC1O75940 HNRNPH1-249ENST00000524180 997 ntTSL 512.77□□□□□ -0.375e-28■□□□□ 9.4
SMNDC1O75940 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.082e-6■□□□□ 9.4
SMNDC1O75940 ARHGAP11B-203ENST00000563110 2043 ntTSL 1 (best)15.5■□□□□ 0.072e-6■□□□□ 9.4
SMNDC1O75940 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.052e-6■□□□□ 9.4
SMNDC1O75940 ARHGAP11B-204ENST00000564902 1161 ntTSL 1 (best)9.15□□□□□ -0.942e-6■□□□□ 9.4
SMNDC1O75940 RACK1-203ENST00000502844 1460 ntTSL 313.74□□□□□ -0.215e-84■□□□□ 9.4
SMNDC1O75940 RACK1-230ENST00000513060 1651 ntTSL 512.05□□□□□ -0.485e-84■□□□□ 9.4
SMNDC1O75940 RACK1-202ENST00000502548 1090 ntTSL 1 (best)11.61□□□□□ -0.555e-84■□□□□ 9.4
SMNDC1O75940 RACK1-229ENST00000513027 697 ntTSL 311.54□□□□□ -0.565e-84■□□□□ 9.4
SMNDC1O75940 RACK1-223ENST00000510199 1100 ntTSL 310.54□□□□□ -0.725e-84■□□□□ 9.4
SMNDC1O75940 RACK1-226ENST00000511900 922 ntTSL 5 BASIC10.29□□□□□ -0.765e-84■□□□□ 9.4
SMNDC1O75940 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.945e-84■□□□□ 9.4
SMNDC1O75940 RACK1-212ENST00000505461 1005 ntTSL 58.85□□□□□ -0.995e-84■□□□□ 9.4
SMNDC1O75940 RACK1-224ENST00000511473 1150 ntTSL 58.82□□□□□ -15e-84■□□□□ 9.4
SMNDC1O75940 RACK1-225ENST00000511566 825 ntTSL 3 BASIC8.82□□□□□ -15e-84■□□□□ 9.4
SMNDC1O75940 RACK1-219ENST00000508682 1208 ntTSL 58.74□□□□□ -1.015e-84■□□□□ 9.4
SMNDC1O75940 RACK1-234ENST00000515417 873 ntTSL 38.69□□□□□ -1.025e-84■□□□□ 9.4
SMNDC1O75940 RACK1-210ENST00000504325 1098 ntTSL 1 (best)8.33□□□□□ -1.085e-84■□□□□ 9.4
SMNDC1O75940 RACK1-228ENST00000512968 1058 ntTSL 58.27□□□□□ -1.095e-84■□□□□ 9.4
SMNDC1O75940 RACK1-208ENST00000503494 843 ntTSL 38.14□□□□□ -1.115e-84■□□□□ 9.4
SMNDC1O75940 RACK1-211ENST00000504726 388 ntTSL 5 BASIC7.79□□□□□ -1.165e-84■□□□□ 9.4
SMNDC1O75940 RACK1-215ENST00000507261 590 ntTSL 37.48□□□□□ -1.215e-84■□□□□ 9.4
SMNDC1O75940 RACK1-201ENST00000376817 965 ntTSL 5 BASIC7.46□□□□□ -1.225e-84■□□□□ 9.4
SMNDC1O75940 RACK1-213ENST00000506312 559 ntTSL 57.26□□□□□ -1.255e-84■□□□□ 9.4
SMNDC1O75940 RACK1-206ENST00000503081 587 ntTSL 37.25□□□□□ -1.255e-84■□□□□ 9.4
SMNDC1O75940 RACK1-214ENST00000507000 685 ntTSL 56.2□□□□□ -1.425e-84■□□□□ 9.4
SMNDC1O75940 RACK1-231ENST00000514183 1439 ntTSL 26.14□□□□□ -1.435e-84■□□□□ 9.4
SMNDC1O75940 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.01□□□□□ -1.455e-84■□□□□ 9.4
SMNDC1O75940 RACK1-220ENST00000508963 581 ntTSL 25.49□□□□□ -1.535e-84■□□□□ 9.4
SMNDC1O75940 PTBP1-217ENST00000592113 1548 ntTSL 519.92■□□□□ 0.782e-6■□□□□ 9.4
SMNDC1O75940 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.82■□□□□ 0.762e-6■□□□□ 9.4
SMNDC1O75940 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.682e-6■□□□□ 9.4
SMNDC1O75940 RSAD1-208ENST00000515221 1029 ntTSL 218.74■□□□□ 0.592e-6■□□□□ 9.4
SMNDC1O75940 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.35■□□□□ 0.533e-8■□□□□ 9.4
SMNDC1O75940 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.463e-8■□□□□ 9.4
SMNDC1O75940 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.93■□□□□ 0.463e-8■□□□□ 9.4
SMNDC1O75940 PIK3CB-204ENST00000462898 4747 ntTSL 517.51■□□□□ 0.392e-6■□□□□ 9.4
SMNDC1O75940 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.382e-6■□□□□ 9.4
SMNDC1O75940 PTBP1-218ENST00000592804 742 ntTSL 217.38■□□□□ 0.372e-6■□□□□ 9.4
SMNDC1O75940 DPAGT1-210ENST00000481084 2343 ntTSL 217.16■□□□□ 0.343e-8■□□□□ 9.4
SMNDC1O75940 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.272e-6■□□□□ 9.4
SMNDC1O75940 TIAL1-211ENST00000489822 2222 ntTSL 216.67■□□□□ 0.263e-34■□□□□ 9.4
SMNDC1O75940 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.242e-6■□□□□ 9.4
SMNDC1O75940 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.45■□□□□ 0.223e-8■□□□□ 9.4
SMNDC1O75940 TIAL1-213ENST00000497671 2321 ntTSL 1 (best)16.27■□□□□ 0.23e-34■□□□□ 9.4
SMNDC1O75940 ASB1-203ENST00000438264 1048 ntTSL 316.02■□□□□ 0.162e-6■□□□□ 9.4
SMNDC1O75940 ITGB1-215ENST00000488494 540 ntTSL 415.96■□□□□ 0.153e-8■□□□□ 9.4
SMNDC1O75940 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.133e-8■□□□□ 9.4
SMNDC1O75940 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.75■□□□□ 0.112e-6■□□□□ 9.4
SMNDC1O75940 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.63■□□□□ 0.093e-8■□□□□ 9.4
SMNDC1O75940 RSAD1-203ENST00000504284 1064 ntTSL 515.62■□□□□ 0.092e-6■□□□□ 9.4
SMNDC1O75940 SRRT-204ENST00000448764 1607 ntTSL 515.37■□□□□ 0.052e-6■□□□□ 9.4
SMNDC1O75940 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.85□□□□□ -0.033e-8■□□□□ 9.4
SMNDC1O75940 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.042e-6■□□□□ 9.4
SMNDC1O75940 DPAGT1-219ENST00000640747 1813 ntTSL 514.72□□□□□ -0.053e-8■□□□□ 9.4
SMNDC1O75940 SRRT-212ENST00000487311 563 ntTSL 214.63□□□□□ -0.072e-6■□□□□ 9.4
SMNDC1O75940 ITGB1-211ENST00000475184 552 ntTSL 414.43□□□□□ -0.13e-8■□□□□ 9.4
SMNDC1O75940 RSAD1-204ENST00000506211 930 ntTSL 314.42□□□□□ -0.12e-6■□□□□ 9.4
SMNDC1O75940 ITGB1-210ENST00000474568 788 ntTSL 514.38□□□□□ -0.113e-8■□□□□ 9.4
SMNDC1O75940 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.38□□□□□ -0.111e-8■□□□□ 9.4
SMNDC1O75940 ITGB1-204ENST00000417122 569 ntTSL 414.04□□□□□ -0.163e-8■□□□□ 9.4
SMNDC1O75940 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.66□□□□□ -0.223e-8■□□□□ 9.4
SMNDC1O75940 DPAGT1-202ENST00000392834 1817 ntTSL 213.35□□□□□ -0.273e-8■□□□□ 9.4
SMNDC1O75940 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.33e-8■□□□□ 9.4
SMNDC1O75940 DPAGT1-204ENST00000414373 1638 ntTSL 513.13□□□□□ -0.313e-8■□□□□ 9.4
SMNDC1O75940 BCR-207ENST00000463770 168 ntTSL 1 (best)13.06□□□□□ -0.323e-8■□□□□ 9.4
SMNDC1O75940 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.332e-6■□□□□ 9.4
SMNDC1O75940 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.352e-6■□□□□ 9.4
SMNDC1O75940 BCR-212ENST00000479188 658 ntTSL 412.28□□□□□ -0.443e-8■□□□□ 9.4
SMNDC1O75940 ITGB1-202ENST00000396033 3784 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.463e-8■□□□□ 9.4
SMNDC1O75940 ASB1-209ENST00000491653 818 ntTSL 212.09□□□□□ -0.472e-6■□□□□ 9.4
SMNDC1O75940 SRRT-213ENST00000611405 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.512e-6■□□□□ 9.4
SMNDC1O75940 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC11.6□□□□□ -0.551e-8■□□□□ 9.4
SMNDC1O75940 ASB1-204ENST00000463352 569 ntTSL 311.31□□□□□ -0.62e-6■□□□□ 9.4
Retrieved 100 of 11,362 protein–RNA pairs in 276.6 ms