Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.53■□□□□ 0.56
SUPT3HO75486 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.53■□□□□ 0.56
SUPT3HO75486 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT3HO75486 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.53■□□□□ 0.56
SUPT3HO75486 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT3HO75486 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.53■□□□□ 0.56
SUPT3HO75486 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT3HO75486 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT3HO75486 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SUPT3HO75486 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
SUPT3HO75486 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.52■□□□□ 0.56
SUPT3HO75486 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT3HO75486 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT3HO75486 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT3HO75486 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT3HO75486 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.52■□□□□ 0.56
SUPT3HO75486 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT3HO75486 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT3HO75486 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT3HO75486 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT3HO75486 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
SUPT3HO75486 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT3HO75486 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT3HO75486 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.52■□□□□ 0.56
SUPT3HO75486 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SUPT3HO75486 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT3HO75486 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SUPT3HO75486 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.52■□□□□ 0.56
SUPT3HO75486 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT3HO75486 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.52■□□□□ 0.56
SUPT3HO75486 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.52■□□□□ 0.56
SUPT3HO75486 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SUPT3HO75486 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SUPT3HO75486 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SUPT3HO75486 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SUPT3HO75486 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SUPT3HO75486 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SUPT3HO75486 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SUPT3HO75486 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SUPT3HO75486 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SUPT3HO75486 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SUPT3HO75486 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
SUPT3HO75486 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SUPT3HO75486 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SUPT3HO75486 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.51■□□□□ 0.55
SUPT3HO75486 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
SUPT3HO75486 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SUPT3HO75486 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SUPT3HO75486 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.51■□□□□ 0.55
SUPT3HO75486 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.51■□□□□ 0.55
SUPT3HO75486 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.51■□□□□ 0.55
SUPT3HO75486 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.51■□□□□ 0.55
SUPT3HO75486 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SUPT3HO75486 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
SUPT3HO75486 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.51■□□□□ 0.55
SUPT3HO75486 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SUPT3HO75486 RCC2P6-201ENST00000526625 1557 ntBASIC18.51■□□□□ 0.55
SUPT3HO75486 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.51■□□□□ 0.55
SUPT3HO75486 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SUPT3HO75486 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SUPT3HO75486 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUPT3HO75486 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.5■□□□□ 0.55
SUPT3HO75486 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.5■□□□□ 0.55
SUPT3HO75486 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.5■□□□□ 0.55
SUPT3HO75486 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUPT3HO75486 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SUPT3HO75486 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SUPT3HO75486 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUPT3HO75486 AL353807.1-201ENST00000427475 662 ntBASIC18.5■□□□□ 0.55
SUPT3HO75486 KSR1P1-201ENST00000446298 240 ntBASIC18.5■□□□□ 0.55
SUPT3HO75486 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.5■□□□□ 0.55
SUPT3HO75486 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SUPT3HO75486 RPPH1-201ENST00000516869 333 ntBASIC18.5■□□□□ 0.55
SUPT3HO75486 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUPT3HO75486 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SUPT3HO75486 AL353708.3-201ENST00000610272 989 ntBASIC18.5■□□□□ 0.55
SUPT3HO75486 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.5■□□□□ 0.55
SUPT3HO75486 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUPT3HO75486 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SUPT3HO75486 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SUPT3HO75486 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.5■□□□□ 0.55
SUPT3HO75486 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms