Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.16■□□□□ 0.34
IDH3BO43837 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
IDH3BO43837 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
IDH3BO43837 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 POM121L13P-201ENST00000422362 380 ntBASIC17.16■□□□□ 0.34
IDH3BO43837 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.16■□□□□ 0.34
IDH3BO43837 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.16■□□□□ 0.34
IDH3BO43837 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.16■□□□□ 0.34
IDH3BO43837 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.16■□□□□ 0.34
IDH3BO43837 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.16■□□□□ 0.34
IDH3BO43837 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.16■□□□□ 0.34
IDH3BO43837 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.16■□□□□ 0.34
IDH3BO43837 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IDH3BO43837 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IDH3BO43837 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IDH3BO43837 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IDH3BO43837 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.15■□□□□ 0.34
IDH3BO43837 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
IDH3BO43837 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IDH3BO43837 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.15■□□□□ 0.34
IDH3BO43837 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.15■□□□□ 0.34
IDH3BO43837 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
IDH3BO43837 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
IDH3BO43837 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.15■□□□□ 0.34
IDH3BO43837 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IDH3BO43837 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
IDH3BO43837 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
IDH3BO43837 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.15■□□□□ 0.34
IDH3BO43837 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IDH3BO43837 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
IDH3BO43837 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IDH3BO43837 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IDH3BO43837 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
IDH3BO43837 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IDH3BO43837 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
IDH3BO43837 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IDH3BO43837 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
IDH3BO43837 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.15■□□□□ 0.34
IDH3BO43837 AC009053.2-201ENST00000563701 2365 ntBASIC17.15■□□□□ 0.34
IDH3BO43837 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IDH3BO43837 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.15■□□□□ 0.34
IDH3BO43837 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IDH3BO43837 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.15■□□□□ 0.34
IDH3BO43837 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
IDH3BO43837 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
IDH3BO43837 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.14■□□□□ 0.34
IDH3BO43837 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3BO43837 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3BO43837 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
IDH3BO43837 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3BO43837 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
IDH3BO43837 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
IDH3BO43837 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.14■□□□□ 0.33
IDH3BO43837 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3BO43837 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
IDH3BO43837 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.14■□□□□ 0.33
IDH3BO43837 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3BO43837 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3BO43837 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3BO43837 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.14■□□□□ 0.33
IDH3BO43837 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
IDH3BO43837 AC141586.5-201ENST00000624546 2050 ntBASIC17.14■□□□□ 0.33
IDH3BO43837 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IDH3BO43837 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
IDH3BO43837 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.14■□□□□ 0.33
IDH3BO43837 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
IDH3BO43837 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.13■□□□□ 0.33
IDH3BO43837 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.13■□□□□ 0.33
IDH3BO43837 AL512353.2-201ENST00000448759 1962 ntBASIC17.13■□□□□ 0.33
IDH3BO43837 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
IDH3BO43837 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
IDH3BO43837 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IDH3BO43837 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms