Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.74■□□□□ 0.43
UPK1AO00322 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.74■□□□□ 0.43
UPK1AO00322 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.74■□□□□ 0.43
UPK1AO00322 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK1AO00322 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.74■□□□□ 0.43
UPK1AO00322 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.74■□□□□ 0.43
UPK1AO00322 Z99916.2-201ENST00000604037 246 ntBASIC17.74■□□□□ 0.43
UPK1AO00322 AP001412.1-201ENST00000608405 714 ntBASIC17.74■□□□□ 0.43
UPK1AO00322 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK1AO00322 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK1AO00322 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK1AO00322 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.74■□□□□ 0.43
UPK1AO00322 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UPK1AO00322 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
UPK1AO00322 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UPK1AO00322 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.73■□□□□ 0.43
UPK1AO00322 AC008764.6-201ENST00000595909 2069 ntBASIC17.73■□□□□ 0.43
UPK1AO00322 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
UPK1AO00322 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
UPK1AO00322 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.73■□□□□ 0.43
UPK1AO00322 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
UPK1AO00322 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
UPK1AO00322 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.73■□□□□ 0.43
UPK1AO00322 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.73■□□□□ 0.43
UPK1AO00322 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.73■□□□□ 0.43
UPK1AO00322 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.73■□□□□ 0.43
UPK1AO00322 AL049637.2-201ENST00000641778 930 ntBASIC17.73■□□□□ 0.43
UPK1AO00322 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 FSCN1P1-201ENST00000568912 1481 ntBASIC17.73■□□□□ 0.43
UPK1AO00322 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.73■□□□□ 0.43
UPK1AO00322 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UPK1AO00322 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.73■□□□□ 0.43
UPK1AO00322 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPK1AO00322 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
UPK1AO00322 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.72■□□□□ 0.43
UPK1AO00322 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 AC073592.3-201ENST00000625118 1834 ntBASIC17.72■□□□□ 0.43
UPK1AO00322 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
UPK1AO00322 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.72■□□□□ 0.43
UPK1AO00322 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.72■□□□□ 0.43
UPK1AO00322 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
UPK1AO00322 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
UPK1AO00322 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UPK1AO00322 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.72■□□□□ 0.43
UPK1AO00322 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.72■□□□□ 0.43
UPK1AO00322 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
UPK1AO00322 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.72■□□□□ 0.43
UPK1AO00322 FAM207BP-201ENST00000447172 505 ntBASIC17.72■□□□□ 0.43
UPK1AO00322 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.72■□□□□ 0.43
UPK1AO00322 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.72■□□□□ 0.43
UPK1AO00322 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.72■□□□□ 0.43
UPK1AO00322 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.72■□□□□ 0.43
UPK1AO00322 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.72■□□□□ 0.43
UPK1AO00322 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
UPK1AO00322 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.72■□□□□ 0.43
UPK1AO00322 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UPK1AO00322 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.72■□□□□ 0.43
UPK1AO00322 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.71■□□□□ 0.43
UPK1AO00322 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.71■□□□□ 0.43
UPK1AO00322 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1AO00322 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1AO00322 FZD10-202ENST00000539839 3282 ntBASIC17.71■□□□□ 0.43
UPK1AO00322 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
UPK1AO00322 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1AO00322 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.71■□□□□ 0.43
UPK1AO00322 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.71■□□□□ 0.43
UPK1AO00322 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UPK1AO00322 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms