Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 AC009113.1-201ENST00000570267 2443 ntBASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 AL023803.3-201ENST00000615559 522 ntBASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC162PA2VCL2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 MIR4674-201ENST00000582457 87 ntBASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC162PA2VCL2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 AC126763.1-201ENST00000552015 2118 ntBASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC162PA2VCL2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 KRT8P9-201ENST00000558927 1449 ntBASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 SLC25A1P2-201ENST00000430693 912 ntBASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 MCCD1P1-208ENST00000445732 328 ntBASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC162PA2VCL2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms