Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV2A0A0B4J234 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 AC093525.10-201ENST00000625130 1569 ntBASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 KRT8P32-201ENST00000512863 1461 ntBASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 AL355075.4-201ENST00000554988 638 ntBASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV2A0A0B4J234 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.15
TRAV2A0A0B4J234 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.15□□□□□ -0.15
TRAV2A0A0B4J234 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
TRAV2A0A0B4J234 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 AC079598.2-202ENST00000546624 1451 ntBASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 AP000525.1-201ENST00000608286 694 ntBASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 AL512353.2-201ENST00000448759 1962 ntBASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV2A0A0B4J234 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms