Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 AC036111.1-201ENST00000533973 1582 ntBASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 AC010203.1-204ENST00000548782 407 ntBASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAI2Q9Y5P3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 CROCCP3-202ENST00000420820 1947 ntBASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 AC006011.2-201ENST00000621313 1158 ntBASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 AL358472.4-201ENST00000633140 710 ntBASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 AL357033.4-201ENST00000617703 1807 ntBASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI2Q9Y5P3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 KRT126P-201ENST00000549467 1181 ntBASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAI2Q9Y5P3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 MIR564-202ENST00000385049 94 ntBASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 LIN28AP1-201ENST00000429574 405 ntBASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 AL512604.3-201ENST00000569583 964 ntBASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 AC093525.10-201ENST00000625130 1569 ntBASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI2Q9Y5P3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms