Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 AC084018.2-201ENST00000613093 2607 ntBASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 AC239809.2-201ENST00000415381 517 ntBASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 RN7SL471P-201ENST00000580476 299 ntBASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 AL031598.1-201ENST00000561511 1773 ntBASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
R3HCC1Q9Y3T6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 AC142381.4-202ENST00000563973 229 ntBASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
R3HCC1Q9Y3T6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
R3HCC1Q9Y3T6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 PRORSD1P-201ENST00000295112 541 ntBASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 AL158047.1-201ENST00000445918 881 ntBASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 AC233263.1-201ENST00000578059 224 ntBASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 MTDHP1-201ENST00000605323 784 ntBASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms