Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 RAP2CP1-201ENST00000605103 478 ntBASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.66■□□□□ 0.1
KCNIP3Q9Y2W7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 AC034268.1-201ENST00000441047 882 ntBASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 AC011270.2-201ENST00000624293 2550 ntBASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KCNIP3Q9Y2W7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
KCNIP3Q9Y2W7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 AC007322.1-201ENST00000426983 750 ntBASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 AC005829.2-201ENST00000571422 1056 ntBASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KCNIP3Q9Y2W7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 AC008764.6-201ENST00000595909 2069 ntBASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KCNIP3Q9Y2W7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms