Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.31■□□□□ 0.04
RCL1Q9Y2P8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 AL390719.1-204ENST00000412397 1219 ntBASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 AC073210.2-201ENST00000430369 194 ntBASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RCL1Q9Y2P8 AC135776.1-201ENST00000319817 2481 ntBASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 NTF6G-201ENST00000591094 616 ntBASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 AC124283.5-201ENST00000624661 1809 ntBASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 PCDHA12-202ENST00000613593 2588 ntBASIC15.29■□□□□ 0.04
RCL1Q9Y2P8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 AP006587.1-201ENST00000534129 1502 ntBASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms