Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 AC141586.3-201ENST00000562166 1838 ntBASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 COX11P1-201ENST00000489116 835 ntBASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FNDC3AQ9Y2H6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 AC010653.2-201ENST00000623505 997 ntBASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 AL161938.1-201ENST00000569833 2180 ntBASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.1■□□□□ 0.65
FNDC3AQ9Y2H6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 AC092338.2-201ENST00000568827 1415 ntBASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 AP000974.1-201ENST00000623909 2387 ntBASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 TSPY23P-201ENST00000440136 739 ntBASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 KRT18P56-201ENST00000507275 550 ntBASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
FNDC3AQ9Y2H6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
FNDC3AQ9Y2H6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
FNDC3AQ9Y2H6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
FNDC3AQ9Y2H6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
FNDC3AQ9Y2H6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FNDC3AQ9Y2H6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FNDC3AQ9Y2H6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
FNDC3AQ9Y2H6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.08■□□□□ 0.64
FNDC3AQ9Y2H6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.08■□□□□ 0.64
FNDC3AQ9Y2H6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FNDC3AQ9Y2H6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.08■□□□□ 0.64
FNDC3AQ9Y2H6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.08■□□□□ 0.64
FNDC3AQ9Y2H6 AC141257.4-201ENST00000634557 245 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms