Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERGIC3Q9Y282 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ERGIC3Q9Y282 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERGIC3Q9Y282 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.08■□□□□ 0.33
ERGIC3Q9Y282 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERGIC3Q9Y282 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERGIC3Q9Y282 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERGIC3Q9Y282 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.08■□□□□ 0.33
ERGIC3Q9Y282 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERGIC3Q9Y282 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 AL355472.2-201ENST00000422958 438 ntBASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ERGIC3Q9Y282 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 KRT18P11-201ENST00000435214 1283 ntBASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 KRT18P61-201ENST00000585825 1298 ntBASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 AC069236.1-201ENST00000604339 616 ntBASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 AL645608.8-201ENST00000606034 2086 ntBASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 AD000864.1-201ENST00000624076 2295 ntBASIC17.07■□□□□ 0.32
ERGIC3Q9Y282 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 AC068338.2-201ENST00000563278 1430 ntBASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.06■□□□□ 0.32
ERGIC3Q9Y282 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms