Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 POM121L13P-201ENST00000422362 380 ntBASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 AC142086.2-201ENST00000569753 217 ntBASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 AC104771.1-201ENST00000603335 964 ntBASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGB4Q9UN71 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGB4Q9UN71 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.14■□□□□ 0.5
PCDHGB4Q9UN71 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGB4Q9UN71 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGB4Q9UN71 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB4Q9UN71 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB4Q9UN71 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 AC004264.1-201ENST00000608354 794 ntBASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB4Q9UN71 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms