Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 AL023875.1-201ENST00000640777 796 ntBASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL4Q9UJQ4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 AL357033.4-201ENST00000617703 1807 ntBASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SALL4Q9UJQ4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
SALL4Q9UJQ4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SALL4Q9UJQ4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
SALL4Q9UJQ4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms