Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PHACTR1Q9C0D0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PHACTR1Q9C0D0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 AC008556.1-201ENST00000610908 2040 ntBASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 AC135776.1-201ENST00000319817 2481 ntBASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 AP000997.3-201ENST00000623333 2250 ntBASIC18.98■□□□□ 0.63
PHACTR1Q9C0D0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 KRT17P3-201ENST00000420566 1262 ntBASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 AC004980.1-204ENST00000429707 299 ntBASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 AC131212.4-201ENST00000623606 975 ntBASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PHACTR1Q9C0D0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 AP003097.1-201ENST00000530657 1135 ntBASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHACTR1Q9C0D0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms