Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM2Q9C040 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM2Q9C040 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRIM2Q9C040 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM2Q9C040 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM2Q9C040 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.24■□□□□ 0.35
TRIM2Q9C040 AC130371.2-201ENST00000619443 611 ntBASIC17.24■□□□□ 0.35
TRIM2Q9C040 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM2Q9C040 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM2Q9C040 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM2Q9C040 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM2Q9C040 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM2Q9C040 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM2Q9C040 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM2Q9C040 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM2Q9C040 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM2Q9C040 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM2Q9C040 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM2Q9C040 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM2Q9C040 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM2Q9C040 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM2Q9C040 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM2Q9C040 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM2Q9C040 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 FAM207BP-201ENST00000447172 505 ntBASIC17.23■□□□□ 0.35
TRIM2Q9C040 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM2Q9C040 AP001412.1-201ENST00000608405 714 ntBASIC17.23■□□□□ 0.35
TRIM2Q9C040 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM2Q9C040 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM2Q9C040 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM2Q9C040 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 KRT8P32-201ENST00000512863 1461 ntBASIC17.23■□□□□ 0.35
TRIM2Q9C040 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM2Q9C040 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM2Q9C040 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM2Q9C040 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM2Q9C040 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM2Q9C040 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRIM2Q9C040 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRIM2Q9C040 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM2Q9C040 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRIM2Q9C040 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRIM2Q9C040 CKBP1-201ENST00000565489 1086 ntBASIC17.22■□□□□ 0.35
TRIM2Q9C040 MIR6786-201ENST00000616843 113 ntBASIC17.22■□□□□ 0.35
TRIM2Q9C040 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
TRIM2Q9C040 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM2Q9C040 AL049637.2-201ENST00000641778 930 ntBASIC17.22■□□□□ 0.35
TRIM2Q9C040 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM2Q9C040 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRIM2Q9C040 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM2Q9C040 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM2Q9C040 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 FSCN1P1-201ENST00000568912 1481 ntBASIC17.21■□□□□ 0.35
TRIM2Q9C040 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms