Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 TSPY23P-201ENST00000440136 739 ntBASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 AL160286.2-201ENST00000567150 934 ntBASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.33■□□□□ 0.68
FOXP3Q9BZS1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 AC087499.1-201ENST00000418141 1075 ntBASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FOXP3Q9BZS1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 HEIH-201ENST00000623091 1652 ntBASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
FOXP3Q9BZS1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXP3Q9BZS1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms