Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
IFT43Q96FT9 RN7SL850P-201ENST00000579959 291 ntBASIC19.28■□□□□ 0.68
IFT43Q96FT9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.28■□□□□ 0.68
IFT43Q96FT9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.28■□□□□ 0.68
IFT43Q96FT9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IFT43Q96FT9 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.28■□□□□ 0.68
IFT43Q96FT9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.28■□□□□ 0.68
IFT43Q96FT9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
IFT43Q96FT9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
IFT43Q96FT9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
IFT43Q96FT9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
IFT43Q96FT9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.27■□□□□ 0.68
IFT43Q96FT9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.27■□□□□ 0.68
IFT43Q96FT9 NOC2LP1-202ENST00000452600 2235 ntBASIC19.27■□□□□ 0.68
IFT43Q96FT9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IFT43Q96FT9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.27■□□□□ 0.68
IFT43Q96FT9 C2orf69P3-201ENST00000565542 1120 ntBASIC19.27■□□□□ 0.68
IFT43Q96FT9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.27■□□□□ 0.68
IFT43Q96FT9 AC130371.2-201ENST00000619443 611 ntBASIC19.27■□□□□ 0.68
IFT43Q96FT9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IFT43Q96FT9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IFT43Q96FT9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.27■□□□□ 0.68
IFT43Q96FT9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.27■□□□□ 0.68
IFT43Q96FT9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.27■□□□□ 0.67
IFT43Q96FT9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
IFT43Q96FT9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.27■□□□□ 0.67
IFT43Q96FT9 CYP2D8P-201ENST00000433633 1490 ntBASIC19.27■□□□□ 0.67
IFT43Q96FT9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
IFT43Q96FT9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
IFT43Q96FT9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
IFT43Q96FT9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
IFT43Q96FT9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
IFT43Q96FT9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.26■□□□□ 0.67
IFT43Q96FT9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 KRT8P11-201ENST00000409686 1436 ntBASIC19.26■□□□□ 0.67
IFT43Q96FT9 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.26■□□□□ 0.67
IFT43Q96FT9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.26■□□□□ 0.67
IFT43Q96FT9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.26■□□□□ 0.67
IFT43Q96FT9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
IFT43Q96FT9 AL390955.1-201ENST00000428694 934 ntBASIC19.26■□□□□ 0.67
IFT43Q96FT9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.26■□□□□ 0.67
IFT43Q96FT9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.26■□□□□ 0.67
IFT43Q96FT9 PRSS44-201ENST00000515154 1146 ntBASIC19.26■□□□□ 0.67
IFT43Q96FT9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.26■□□□□ 0.67
IFT43Q96FT9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
IFT43Q96FT9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.26■□□□□ 0.67
IFT43Q96FT9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
IFT43Q96FT9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
IFT43Q96FT9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
IFT43Q96FT9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.25■□□□□ 0.67
IFT43Q96FT9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
IFT43Q96FT9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.25■□□□□ 0.67
IFT43Q96FT9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.25■□□□□ 0.67
IFT43Q96FT9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
IFT43Q96FT9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.25■□□□□ 0.67
IFT43Q96FT9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
IFT43Q96FT9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.25■□□□□ 0.67
IFT43Q96FT9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
IFT43Q96FT9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.25■□□□□ 0.67
IFT43Q96FT9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
IFT43Q96FT9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IFT43Q96FT9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
IFT43Q96FT9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IFT43Q96FT9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms