Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC3Q96DC8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 STARP1-201ENST00000397973 869 ntBASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 MYC-208ENST00000641036 567 ntBASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC3Q96DC8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
ECHDC3Q96DC8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 LINC01238-205ENST00000567549 1107 ntBASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ECHDC3Q96DC8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 SPDYE15P-201ENST00000424157 909 ntBASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 KRT18P38-201ENST00000449496 1282 ntBASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.69■□□□□ 0.58
ECHDC3Q96DC8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC3Q96DC8 CROCCP3-202ENST00000420820 1947 ntBASIC18.68■□□□□ 0.58
ECHDC3Q96DC8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC3Q96DC8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC3Q96DC8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC3Q96DC8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC3Q96DC8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC3Q96DC8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ECHDC3Q96DC8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms