Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 LINC01238-205ENST00000567549 1107 ntBASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH3KBP1Q96B97 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 AC104076.2-201ENST00000448912 469 ntBASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 DUX4L26-201ENST00000489078 1255 ntBASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 TEX21P-204ENST00000641479 1693 ntBASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH3KBP1Q96B97 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SH3KBP1Q96B97 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SH3KBP1Q96B97 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.52■□□□□ 0.55
SH3KBP1Q96B97 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SH3KBP1Q96B97 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SH3KBP1Q96B97 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SH3KBP1Q96B97 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
SH3KBP1Q96B97 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 ARMC10P1-201ENST00000313754 855 ntBASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 AL138966.2-201ENST00000621997 464 ntBASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 AL031432.5-201ENST00000641059 760 ntBASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 AC004408.2-201ENST00000623613 2777 ntBASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 AC141586.3-201ENST00000562166 1838 ntBASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH3KBP1Q96B97 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 AK4P3-201ENST00000418260 669 ntBASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 AP003041.3-201ENST00000527151 707 ntBASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 AL445228.2-201ENST00000605589 952 ntBASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms