Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 AC133681.1-201ENST00000465482 601 ntBASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 RPS2P4-201ENST00000476944 856 ntBASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 AL121829.2-201ENST00000620908 328 ntBASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 OR6D1P-202ENST00000641007 5290 ntBASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAB40AQ8WXH6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 AC008550.1-201ENST00000511500 884 ntBASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 AC124016.1-201ENST00000609552 612 ntBASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 AC110285.5-201ENST00000611501 352 ntBASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40AQ8WXH6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 MIR718-201ENST00000390190 70 ntBASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB40AQ8WXH6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
RAB40AQ8WXH6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RAB40AQ8WXH6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 KRASP1-201ENST00000407852 552 ntBASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.45■□□□□ 0.22
RAB40AQ8WXH6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms