Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 SPDYE15P-201ENST00000424157 909 ntBASIC16.91■□□□□ 0.3
RNF138Q8WVD3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 KRT18P38-201ENST00000449496 1282 ntBASIC16.91■□□□□ 0.3
RNF138Q8WVD3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 HYMAI.1-201ENST00000620949 238 ntBASIC16.91■□□□□ 0.3
RNF138Q8WVD3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RNF138Q8WVD3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 RASA4DP-201ENST00000460726 1199 ntBASIC16.9■□□□□ 0.3
RNF138Q8WVD3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 AC034232.1-201ENST00000506026 1064 ntBASIC16.9■□□□□ 0.3
RNF138Q8WVD3 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 AC073592.3-201ENST00000625118 1834 ntBASIC16.9■□□□□ 0.3
RNF138Q8WVD3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.9■□□□□ 0.3
RNF138Q8WVD3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.89■□□□□ 0.3
RNF138Q8WVD3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 AL157888.1-201ENST00000631930 593 ntBASIC16.89■□□□□ 0.29
RNF138Q8WVD3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RNF138Q8WVD3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 MIR149-201ENST00000384879 89 ntBASIC16.88■□□□□ 0.29
RNF138Q8WVD3 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.88■□□□□ 0.29
RNF138Q8WVD3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 AC009065.1-201ENST00000564055 1225 ntBASIC16.88■□□□□ 0.29
RNF138Q8WVD3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.88■□□□□ 0.29
RNF138Q8WVD3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF138Q8WVD3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RNF138Q8WVD3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF138Q8WVD3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF138Q8WVD3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF138Q8WVD3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF138Q8WVD3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms