Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC006213.4-201ENST00000616184 634 ntBASIC18.96■□□□□ 0.63
PTCD2Q8WV60 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 AC096733.2-201ENST00000609937 1394 ntBASIC18.95■□□□□ 0.62
PTCD2Q8WV60 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.95■□□□□ 0.62
PTCD2Q8WV60 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 AC090164.3-201ENST00000610780 2143 ntBASIC18.95■□□□□ 0.62
PTCD2Q8WV60 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCD2Q8WV60 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.94■□□□□ 0.62
PTCD2Q8WV60 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCD2Q8WV60 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 ECEL1P2-202ENST00000465689 757 ntBASIC18.93■□□□□ 0.62
PTCD2Q8WV60 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 MTMR9LP-203ENST00000426597 1545 ntBASIC18.93■□□□□ 0.62
PTCD2Q8WV60 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCD2Q8WV60 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCD2Q8WV60 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCD2Q8WV60 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.92■□□□□ 0.62
PTCD2Q8WV60 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.92■□□□□ 0.62
PTCD2Q8WV60 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
PTCD2Q8WV60 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTCD2Q8WV60 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.92■□□□□ 0.62
PTCD2Q8WV60 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.92■□□□□ 0.62
PTCD2Q8WV60 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCD2Q8WV60 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCD2Q8WV60 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PTCD2Q8WV60 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms