Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 GCSHP5-201ENST00000443090 522 ntBASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 AC011506.1-201ENST00000474329 610 ntBASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TRAF3IP1Q8TDR0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRAF3IP1Q8TDR0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRAF3IP1Q8TDR0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRAF3IP1Q8TDR0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.52■□□□□ 0.71
TRAF3IP1Q8TDR0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRAF3IP1Q8TDR0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
TRAF3IP1Q8TDR0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 AC008040.2-201ENST00000461049 708 ntBASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 CKBP1-201ENST00000565489 1086 ntBASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 AP001412.1-201ENST00000608405 714 ntBASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 KRT8P3-201ENST00000519669 1449 ntBASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAF3IP1Q8TDR0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 AC104581.1-202ENST00000635932 2618 ntBASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP1Q8TDR0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRAF3IP1Q8TDR0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms