Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMARCC2Q8TAQ2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 EGLN1P1-201ENST00000531623 762 ntBASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.92■■□□□ 1.1
SMARCC2Q8TAQ2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 TSPY14P-201ENST00000303979 915 ntBASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMARCC2Q8TAQ2 BICD1-207ENST00000551848 1962 ntBASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 AC073592.3-201ENST00000625118 1834 ntBASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 AC135050.7-201ENST00000624508 2218 ntBASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 AC128688.1-201ENST00000487626 519 ntBASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMARCC2Q8TAQ2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.89■■□□□ 1.1
SMARCC2Q8TAQ2 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.89■■□□□ 1.1
SMARCC2Q8TAQ2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
SMARCC2Q8TAQ2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
SMARCC2Q8TAQ2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.89■■□□□ 1.1
SMARCC2Q8TAQ2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 KRT18P21-201ENST00000515767 1272 ntBASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 AC005363.2-201ENST00000618631 242 ntBASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 AL499627.1-201ENST00000569373 2188 ntBASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMARCC2Q8TAQ2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms