Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CFAP61Q8NHU2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CFAP61Q8NHU2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 ZNF815P-204ENST00000434898 1737 ntBASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CFAP61Q8NHU2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP61Q8NHU2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 HLA-A-209ENST00000638375 975 ntBASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CFAP61Q8NHU2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 RPS2P4-201ENST00000476944 856 ntBASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 RARRES2P10-201ENST00000564312 460 ntBASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CFAP61Q8NHU2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms