Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.08■□□□□ 0.65
DNAAF3Q8N9W5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
DNAAF3Q8N9W5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
DNAAF3Q8N9W5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 UBE2SP1-201ENST00000450587 669 ntBASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 AC008040.2-201ENST00000461049 708 ntBASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 B3GAT3P1-201ENST00000471720 806 ntBASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 AC011506.1-201ENST00000474329 610 ntBASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 FSCN1P1-201ENST00000568912 1481 ntBASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
DNAAF3Q8N9W5 AC090164.3-201ENST00000610780 2143 ntBASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 GCSHP5-201ENST00000443090 522 ntBASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 CKBP1-201ENST00000565489 1086 ntBASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 KRT8P3-201ENST00000519669 1449 ntBASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.07■□□□□ 0.64
DNAAF3Q8N9W5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.06■□□□□ 0.64
DNAAF3Q8N9W5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DNAAF3Q8N9W5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.04■□□□□ 0.64
DNAAF3Q8N9W5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
DNAAF3Q8N9W5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
DNAAF3Q8N9W5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DNAAF3Q8N9W5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
DNAAF3Q8N9W5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms