Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APLFQ8IW19 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APLFQ8IW19 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
APLFQ8IW19 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
APLFQ8IW19 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
APLFQ8IW19 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APLFQ8IW19 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
APLFQ8IW19 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
APLFQ8IW19 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
APLFQ8IW19 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
APLFQ8IW19 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.55■□□□□ 0.56
APLFQ8IW19 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.54■□□□□ 0.56
APLFQ8IW19 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
APLFQ8IW19 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
APLFQ8IW19 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 AC124283.5-201ENST00000624661 1809 ntBASIC18.54■□□□□ 0.56
APLFQ8IW19 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.54■□□□□ 0.56
APLFQ8IW19 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.54■□□□□ 0.56
APLFQ8IW19 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.54■□□□□ 0.56
APLFQ8IW19 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.54■□□□□ 0.56
APLFQ8IW19 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.54■□□□□ 0.56
APLFQ8IW19 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 AC012313.1-201ENST00000593393 3059 ntBASIC18.54■□□□□ 0.56
APLFQ8IW19 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
APLFQ8IW19 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.54■□□□□ 0.56
APLFQ8IW19 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
APLFQ8IW19 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APLFQ8IW19 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.53■□□□□ 0.56
APLFQ8IW19 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.53■□□□□ 0.56
APLFQ8IW19 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 UNC93B2-201ENST00000285383 730 ntBASIC18.53■□□□□ 0.56
APLFQ8IW19 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 RBM17P1-201ENST00000453646 1190 ntBASIC18.53■□□□□ 0.56
APLFQ8IW19 AP002982.1-201ENST00000492365 877 ntBASIC18.53■□□□□ 0.56
APLFQ8IW19 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.53■□□□□ 0.56
APLFQ8IW19 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.53■□□□□ 0.56
APLFQ8IW19 RN7SL850P-201ENST00000579959 291 ntBASIC18.53■□□□□ 0.56
APLFQ8IW19 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.53■□□□□ 0.56
APLFQ8IW19 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.53■□□□□ 0.56
APLFQ8IW19 AC092865.7-201ENST00000641832 219 ntBASIC18.53■□□□□ 0.56
APLFQ8IW19 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.53■□□□□ 0.56
APLFQ8IW19 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.53■□□□□ 0.56
APLFQ8IW19 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APLFQ8IW19 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.52■□□□□ 0.56
APLFQ8IW19 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.52■□□□□ 0.56
APLFQ8IW19 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.52■□□□□ 0.56
APLFQ8IW19 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.52■□□□□ 0.56
APLFQ8IW19 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
APLFQ8IW19 AL445228.2-201ENST00000605589 952 ntBASIC18.52■□□□□ 0.56
APLFQ8IW19 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.52■□□□□ 0.56
APLFQ8IW19 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
APLFQ8IW19 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 AC011270.2-201ENST00000624293 2550 ntBASIC18.52■□□□□ 0.56
APLFQ8IW19 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APLFQ8IW19 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
APLFQ8IW19 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
APLFQ8IW19 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms