Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 DUSP5P1-201ENST00000441325 1139 ntBASIC20.87■□□□□ 0.93
TRIM50Q86XT4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 MIR3917-201ENST00000580971 93 ntBASIC20.87■□□□□ 0.93
TRIM50Q86XT4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM50Q86XT4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM50Q86XT4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 KRT18P48-201ENST00000434763 852 ntBASIC20.85■□□□□ 0.93
TRIM50Q86XT4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 CLEC4GP1-201ENST00000596555 870 ntBASIC20.85■□□□□ 0.93
TRIM50Q86XT4 AL121894.2-201ENST00000602977 491 ntBASIC20.85■□□□□ 0.93
TRIM50Q86XT4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM50Q86XT4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 MIR564-202ENST00000385049 94 ntBASIC20.84■□□□□ 0.93
TRIM50Q86XT4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 AL136038.4-201ENST00000603606 1261 ntBASIC20.84■□□□□ 0.93
TRIM50Q86XT4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.84■□□□□ 0.93
TRIM50Q86XT4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 AC012313.10-201ENST00000623509 926 ntBASIC20.84■□□□□ 0.93
TRIM50Q86XT4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
TRIM50Q86XT4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms