Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRTM1Q86UE6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRTM1Q86UE6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRTM1Q86UE6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRTM1Q86UE6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 AC097658.1-201ENST00000475555 843 ntBASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 SOX15-203ENST00000570788 1093 ntBASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 AC008687.6-201ENST00000596318 630 ntBASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRTM1Q86UE6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 GUSBP6-202ENST00000438529 1198 ntBASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 LINC00896-202ENST00000609602 2128 ntBASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 AC093677.2-201ENST00000600169 1863 ntBASIC16.25■□□□□ 0.19
LRRTM1Q86UE6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 C1QL1P1-201ENST00000568105 661 ntBASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 MIR5787-201ENST00000611784 55 ntBASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms