Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 KRT18P21-201ENST00000515767 1272 ntBASIC17.25■□□□□ 0.35
ZNF550Q7Z398 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 AC068587.9-201ENST00000641814 219 ntBASIC17.25■□□□□ 0.35
ZNF550Q7Z398 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ZNF550Q7Z398 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 DGCR10-201ENST00000609839 495 ntBASIC17.24■□□□□ 0.35
ZNF550Q7Z398 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ZNF550Q7Z398 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 NUDT16P1-203ENST00000513809 620 ntBASIC17.23■□□□□ 0.35
ZNF550Q7Z398 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF550Q7Z398 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF550Q7Z398 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms