Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LCA10Q71F78 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LCA10Q71F78 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
LCA10Q71F78 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC10.11□□□□□ -0.79
LCA10Q71F78 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC10.11□□□□□ -0.79
LCA10Q71F78 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
LCA10Q71F78 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC10.11□□□□□ -0.79
LCA10Q71F78 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC10.11□□□□□ -0.79
LCA10Q71F78 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC10.11□□□□□ -0.79
LCA10Q71F78 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LCA10Q71F78 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC10.11□□□□□ -0.79
LCA10Q71F78 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LCA10Q71F78 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
LCA10Q71F78 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LCA10Q71F78 RASA4CP-201ENST00000424092 1398 ntBASIC10.11□□□□□ -0.79
LCA10Q71F78 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC10.11□□□□□ -0.79
LCA10Q71F78 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
LCA10Q71F78 AC008406.3-201ENST00000620001 1374 ntBASIC10.11□□□□□ -0.79
LCA10Q71F78 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LCA10Q71F78 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LCA10Q71F78 AC008741.2-201ENST00000612792 3115 ntBASIC10.11□□□□□ -0.79
LCA10Q71F78 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
LCA10Q71F78 LINC02228-204ENST00000642115 2962 ntBASIC10.11□□□□□ -0.79
LCA10Q71F78 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
LCA10Q71F78 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LCA10Q71F78 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LCA10Q71F78 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC10.1□□□□□ -0.79
LCA10Q71F78 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC10.1□□□□□ -0.79
LCA10Q71F78 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC10.1□□□□□ -0.79
LCA10Q71F78 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC10.1□□□□□ -0.79
LCA10Q71F78 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC10.1□□□□□ -0.79
LCA10Q71F78 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
LCA10Q71F78 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
LCA10Q71F78 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
LCA10Q71F78 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC10.1□□□□□ -0.79
LCA10Q71F78 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
LCA10Q71F78 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
LCA10Q71F78 EBPL-204ENST00000378272 766 ntTSL 3 BASIC10.1□□□□□ -0.79
LCA10Q71F78 POU5F1P4-201ENST00000413175 1085 ntBASIC10.1□□□□□ -0.79
LCA10Q71F78 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC10.1□□□□□ -0.79
LCA10Q71F78 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC10.1□□□□□ -0.79
LCA10Q71F78 AC012414.1-201ENST00000556676 535 ntBASIC10.1□□□□□ -0.79
LCA10Q71F78 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
LCA10Q71F78 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 BANP-201ENST00000286122 2368 ntTSL 5 BASIC10.1□□□□□ -0.79
LCA10Q71F78 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC10.1□□□□□ -0.79
LCA10Q71F78 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
LCA10Q71F78 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC10.1□□□□□ -0.79
LCA10Q71F78 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC10.1□□□□□ -0.79
LCA10Q71F78 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC10.1□□□□□ -0.79
LCA10Q71F78 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LCA10Q71F78 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC10.09□□□□□ -0.79
LCA10Q71F78 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
LCA10Q71F78 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC10.09□□□□□ -0.79
LCA10Q71F78 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 STK25-205ENST00000405883 1904 ntTSL 2 BASIC10.09□□□□□ -0.79
LCA10Q71F78 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
LCA10Q71F78 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
LCA10Q71F78 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC10.09□□□□□ -0.79
LCA10Q71F78 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC10.09□□□□□ -0.79
LCA10Q71F78 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 AC126763.1-201ENST00000552015 2118 ntBASIC10.09□□□□□ -0.79
LCA10Q71F78 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
LCA10Q71F78 BID-213ENST00000615414 2236 ntTSL 5 BASIC10.09□□□□□ -0.79
LCA10Q71F78 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LCA10Q71F78 NT5C3AP1-201ENST00000394500 1012 ntBASIC10.09□□□□□ -0.79
LCA10Q71F78 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC10.09□□□□□ -0.79
LCA10Q71F78 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC10.09□□□□□ -0.79
LCA10Q71F78 AF213884.3-201ENST00000563833 479 ntBASIC10.09□□□□□ -0.79
LCA10Q71F78 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC10.09□□□□□ -0.79
LCA10Q71F78 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms