Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 AC079598.2-202ENST00000546624 1451 ntBASIC18.83■□□□□ 0.6
RAPH1Q70E73 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.83■□□□□ 0.6
RAPH1Q70E73 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAPH1Q70E73 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.82■□□□□ 0.6
RAPH1Q70E73 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAPH1Q70E73 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAPH1Q70E73 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.82■□□□□ 0.6
RAPH1Q70E73 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.82■□□□□ 0.6
RAPH1Q70E73 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.82■□□□□ 0.6
RAPH1Q70E73 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.82■□□□□ 0.6
RAPH1Q70E73 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAPH1Q70E73 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RAPH1Q70E73 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAPH1Q70E73 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.82■□□□□ 0.6
RAPH1Q70E73 AC026366.1-201ENST00000488803 879 ntBASIC18.82■□□□□ 0.6
RAPH1Q70E73 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.82■□□□□ 0.6
RAPH1Q70E73 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.82■□□□□ 0.6
RAPH1Q70E73 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAPH1Q70E73 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.82■□□□□ 0.6
RAPH1Q70E73 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RAPH1Q70E73 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAPH1Q70E73 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAPH1Q70E73 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAPH1Q70E73 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAPH1Q70E73 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAPH1Q70E73 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAPH1Q70E73 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.82■□□□□ 0.6
RAPH1Q70E73 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAPH1Q70E73 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAPH1Q70E73 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.82■□□□□ 0.6
RAPH1Q70E73 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAPH1Q70E73 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAPH1Q70E73 AC020916.1-201ENST00000587762 1774 ntBASIC18.81■□□□□ 0.6
RAPH1Q70E73 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAPH1Q70E73 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAPH1Q70E73 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RAPH1Q70E73 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RAPH1Q70E73 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAPH1Q70E73 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.81■□□□□ 0.6
RAPH1Q70E73 KRASP1-201ENST00000407852 552 ntBASIC18.81■□□□□ 0.6
RAPH1Q70E73 AC239809.2-201ENST00000415381 517 ntBASIC18.81■□□□□ 0.6
RAPH1Q70E73 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.81■□□□□ 0.6
RAPH1Q70E73 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.81■□□□□ 0.6
RAPH1Q70E73 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.81■□□□□ 0.6
RAPH1Q70E73 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAPH1Q70E73 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RAPH1Q70E73 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAPH1Q70E73 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAPH1Q70E73 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAPH1Q70E73 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAPH1Q70E73 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAPH1Q70E73 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.81■□□□□ 0.6
RAPH1Q70E73 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.81■□□□□ 0.6
RAPH1Q70E73 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAPH1Q70E73 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAPH1Q70E73 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.8■□□□□ 0.6
RAPH1Q70E73 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RAPH1Q70E73 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.8■□□□□ 0.6
RAPH1Q70E73 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.8■□□□□ 0.6
RAPH1Q70E73 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RAPH1Q70E73 AC233263.1-201ENST00000578059 224 ntBASIC18.8■□□□□ 0.6
RAPH1Q70E73 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.8■□□□□ 0.6
RAPH1Q70E73 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.8■□□□□ 0.6
RAPH1Q70E73 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RAPH1Q70E73 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.8■□□□□ 0.6
RAPH1Q70E73 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.8■□□□□ 0.6
RAPH1Q70E73 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.8■□□□□ 0.6
RAPH1Q70E73 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.8■□□□□ 0.6
RAPH1Q70E73 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAPH1Q70E73 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RAPH1Q70E73 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAPH1Q70E73 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms