Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 ECEL1P2-202ENST00000465689 757 ntBASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 AP003041.3-201ENST00000527151 707 ntBASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-DQA1Q5Y7H0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 LIN28AP1-201ENST00000429574 405 ntBASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 AL512604.3-201ENST00000569583 964 ntBASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 AL512353.2-201ENST00000448759 1962 ntBASIC17.46■□□□□ 0.39
HLA-DQA1Q5Y7H0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
HLA-DQA1Q5Y7H0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.46■□□□□ 0.38
HLA-DQA1Q5Y7H0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HLA-DQA1Q5Y7H0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 HMGA1P5-201ENST00000412453 271 ntBASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 MCCD1P1-208ENST00000445732 328 ntBASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQA1Q5Y7H0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DQA1Q5Y7H0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1Q5Y7H0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1Q5Y7H0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1Q5Y7H0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1Q5Y7H0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1Q5Y7H0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DQA1Q5Y7H0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1Q5Y7H0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HLA-DQA1Q5Y7H0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1Q5Y7H0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQA1Q5Y7H0 RCC2P3-201ENST00000418112 1537 ntBASIC17.44■□□□□ 0.38
HLA-DQA1Q5Y7H0 ECEL1P3-201ENST00000427961 737 ntBASIC17.44■□□□□ 0.38
HLA-DQA1Q5Y7H0 ATP5G1P1-201ENST00000448724 379 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms