Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 ABALON-201ENST00000629058 1903 ntBASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 HLA-L-209ENST00000420110 1011 ntBASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 AC233263.1-201ENST00000578059 224 ntBASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 NOC2LP1-202ENST00000452600 2235 ntBASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6AP1LQ52LC2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 POU5F1P3-201ENST00000428824 1078 ntBASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 AL445675.2-201ENST00000620291 557 ntBASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6AP1LQ52LC2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 KRT8P11-201ENST00000409686 1436 ntBASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 AC131212.4-201ENST00000623606 975 ntBASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6AP1LQ52LC2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 MTMR9LP-203ENST00000426597 1545 ntBASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 PRSS44-201ENST00000515154 1146 ntBASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 AC068587.9-201ENST00000641814 219 ntBASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 OR6D1P-202ENST00000641007 5290 ntBASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP6AP1LQ52LC2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms